Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745181_0064 | Not Available | Negative | 50503 - 50970 | 17125.0 |
| adp-ribosylglycohydrolase | SAMN02745181_0065 | Not Available | Negative | 50975 - 52054 | 39307.9 |
| hypothetical protein | SAMN02745181_0066 | Not Available | Negative | 52041 - 53321 | 50021.7 |
| 8-oxo-dgtp diphosphatase | SAMN02745181_0067 | Not Available | Negative | 53338 - 54027 | 26410.6 |
| hypothetical protein | SAMN02745181_0068 | Not Available | Positive | 54158 - 54640 | 17294.4 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN02745181_0069 | Not Available | Positive | 54708 - 56510 | 66175.0 |
| hypothetical protein | SAMN02745181_0070 | Not Available | Positive | 56550 - 57443 | 33063.9 |
| thiamine-monophosphate kinase | SAMN02745181_0071 | Not Available | Positive | 57445 - 58335 | 32114.8 |
| hupe / urej protein | SAMN02745181_0072 | Not Available | Positive | 58332 - 59465 | 42515.6 |
| sla1 homology domain 1, shd1 | SAMN02745181_0073 | Not Available | Negative | 59487 - 60701 | 45663.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
