Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase, alpha chain | SAMN02745181_0054 | Not Available | Positive | 40946 - 41746 | 27964.2 |
| diaminopimelate epimerase | SAMN02745181_0055 | Not Available | Positive | 41817 - 42635 | 28965.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN02745181_0056 | Not Available | Positive | 42638 - 43255 | 22620.9 |
| hypothetical protein | SAMN02745181_0057 | Not Available | Negative | 43262 - 44140 | 32045.1 |
| peptidase | SAMN02745181_0058 | Not Available | Negative | 44176 - 44832 | 24348.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN02745181_0059 | Not Available | Negative | 44893 - 45546 | 23372.0 |
| hypothetical protein | SAMN02745181_0060 | Not Available | Positive | 45637 - 46701 | 39021.2 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_0061 | Not Available | Negative | 46872 - 47588 | 24767.3 |
| tryptophan halogenase | SAMN02745181_0062 | Not Available | Positive | 47743 - 49230 | 56133.1 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_0063 | Not Available | Positive | 49518 - 50402 | 29706.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
