Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| concanavalin a-like lectin/glucanases superfamily protein | SAMN02745181_0008 | Not Available | Negative | 4305105 - 4310230 | 178978.0 |
| hypothetical protein | SAMN02745181_0009 | Not Available | Negative | 4310285 - 4311103 | 29190.0 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN02745181_0010 | Not Available | Negative | 4311653 - 4312031 | 13555.6 |
| is66 c-terminal element | SAMN02745181_0012 | Not Available | Positive | 4312032 - 4312271 | 9314.06 |
| hypothetical protein | SAMN02745181_0013 | Not Available | Negative | 4312699 - 4312917 | 8325.96 |
| rhs repeat-associated core domain-containing protein | SAMN02745181_0014 | Not Available | Negative | 4312928 - 4316440 | 126817.0 |
| transposase | SAMN02745181_0016 | Not Available | Negative | 4316538 - 4318082 | 58589.1 |
| transposase | SAMN02745181_0017 | Not Available | Negative | 4318124 - 4318474 | 13201.2 |
| hypothetical protein | SAMN02745181_0018 | Not Available | Negative | 4318468 - 4318821 | 12917.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
