Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallo-peptidase family m12 | SAMN02745181_3894 | Not Available | Positive | 4266289 - 4269927 | 127488.0 |
| cadherin domain-containing protein | SAMN02745181_3895 | Not Available | Positive | 4270276 - 4276152 | 204670.0 |
| hypothetical protein | SAMN02745181_3896 | Not Available | Negative | 4276164 - 4276370 | 7935.66 |
| hypothetical protein | SAMN02745181_3897 | Not Available | Positive | 4276382 - 4276615 | 8121.65 |
| cadherin domain-containing protein | SAMN02745181_3898 | Not Available | Positive | 4276557 - 4282531 | 205838.0 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN02745181_0001 | Not Available | Positive | 4282532 - 4282923 | 13930.1 |
| metallo-peptidase family m12 | SAMN02745181_0003 | Not Available | Positive | 4283822 - 4292326 | 296645.0 |
| metallo-peptidase family m12b reprolysin-like | SAMN02745181_0004 | Not Available | Positive | 4292576 - 4297126 | 157565.0 |
| hypothetical protein | SAMN02745181_0005 | Not Available | Negative | 4297364 - 4297600 | 9284.53 |
| pa14 domain-containing protein | SAMN02745181_0006 | Not Available | Positive | 4297773 - 4305104 | 253829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
