Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 20, domain 2 | SAMN02745181_3823 | Not Available | Negative | 4198133 - 4200199 | 77830.0 |
| hypothetical protein | SAMN02745181_3824 | Not Available | Negative | 4200334 - 4201692 | 50521.2 |
| hypothetical protein | SAMN02745181_3825 | Not Available | Positive | 4201863 - 4202291 | 16323.7 |
| polymorphic outer membrane protein repeat-containing protein/parallel beta-helix repeat (two copies) | SAMN02745181_3826 | Not Available | Negative | 4202310 - 4204697 | 83634.4 |
| Trna-ser | Not Available | Not Available | Positive | 4204849 - 4204941 | Not Available |
| hypothetical protein | SAMN02745181_3828 | Not Available | Positive | 4205104 - 4205340 | 8369.3 |
| hypothetical protein | SAMN02745181_3829 | Not Available | Positive | 4205420 - 4205809 | 14313.7 |
| hypothetical protein | SAMN02745181_3830 | Not Available | Positive | 4205818 - 4206090 | 10140.8 |
| l,d-transpeptidase catalytic domain | SAMN02745181_3831 | Not Available | Negative | 4206243 - 4207073 | 31435.5 |
| methylthioadenosine phosphorylase | SAMN02745181_3832 | Not Available | Positive | 4207181 - 4208038 | 31355.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
