Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 4115689 - 4115764 | Not Available |
| hypothetical protein | SAMN02745181_3722 | Not Available | Negative | 4115834 - 4116919 | 40124.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN02745181_3723 | Not Available | Negative | 4116976 - 4118097 | 41193.0 |
| hypothetical protein | SAMN02745181_3724 | Not Available | Negative | 4118133 - 4118594 | 17138.7 |
| trna (guanine-n7-)-methyltransferase | SAMN02745181_3725 | Not Available | Positive | 4118713 - 4119327 | 24172.9 |
| 2-isopropylmalate synthase | SAMN02745181_3726 | Not Available | Positive | 4119385 - 4121070 | 62839.6 |
| zn-dependent protease (includes spoivfb) | SAMN02745181_3727 | Not Available | Positive | 4121110 - 4121736 | 22889.3 |
| small conductance mechanosensitive channel | SAMN02745181_3728 | Not Available | Negative | 4121812 - 4122654 | 30774.5 |
| protein of unknown function | SAMN02745181_3729 | Not Available | Negative | 4122785 - 4123651 | 32645.8 |
| rep element-mobilizing transposase rayt | SAMN02745181_3732 | Not Available | Positive | 4124228 - 4124686 | 17266.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
