Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secondary thiamine-phosphate synthase enzyme | SAMN02745181_3641 | Not Available | Negative | 4036723 - 4037145 | 15926.1 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN02745181_3642 | Not Available | Positive | 4037397 - 4038956 | 58609.1 |
| polyphosphate kinase | SAMN02745181_3643 | Not Available | Positive | 4038971 - 4041064 | 78814.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02745181_3644 | Not Available | Positive | 4041223 - 4041912 | 26164.3 |
| signal transduction histidine kinase | SAMN02745181_3645 | Not Available | Positive | 4041916 - 4043430 | 56498.1 |
| trypsin-like peptidase domain-containing protein | SAMN02745181_3646 | Not Available | Negative | 4043432 - 4044457 | 37159.5 |
| serine protease do | SAMN02745181_3647 | Not Available | Negative | 4044479 - 4045519 | 37528.7 |
| hypothetical protein | SAMN02745181_3648 | Not Available | Negative | 4045812 - 4046894 | 40883.2 |
| hypothetical protein | SAMN02745181_3649 | Not Available | Negative | 4046891 - 4047463 | 21752.6 |
| hypothetical protein | SAMN02745181_3650 | Not Available | Positive | 4047619 - 4048047 | 15959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
