Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745181_3621 | Not Available | Positive | 4018092 - 4018628 | 19989.1 |
| hypothetical protein | SAMN02745181_3622 | Not Available | Positive | 4018613 - 4019179 | 20933.3 |
| type ii/iii secretion system short domain-containing protein | SAMN02745181_3623 | Not Available | Positive | 4019260 - 4020981 | 62271.0 |
| hypothetical protein | SAMN02745181_3624 | Not Available | Positive | 4021015 - 4021581 | 21161.9 |
| type iv pilus assembly protein pilb | SAMN02745181_3625 | Not Available | Positive | 4021578 - 4023275 | 63551.4 |
| type ii secretory pathway, component pulf | SAMN02745181_3626 | Not Available | Positive | 4023268 - 4024425 | 42622.1 |
| hypothetical protein | SAMN02745181_3627 | Not Available | Positive | 4024438 - 4024857 | 16855.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN02745181_3628 | Not Available | Positive | 4024860 - 4025270 | 14964.1 |
| hypothetical protein | SAMN02745181_3629 | Not Available | Positive | 4025272 - 4025769 | 18174.9 |
| hypothetical protein | SAMN02745181_3630 | Not Available | Positive | 4025790 - 4026542 | 27325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
