Rubritalea squalenifaciens DSM 18772

rodaerobic

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Verrucomicrobiia

Order

Verrucomicrobiales

Family

Rubritaleaceae

Genus

Rubritalea

Description

Rubritalea squalenifaciens DSM 18772 is a Gram-negative, aerobic, non-motile bacterium characterized by its rod shape. This species thrives optimally at a temperature of 25°C, placing it within the mesophilic range, which is typically between 20°C and 45°C for microbial growth. With a single replicon, Rubritalea squalenifaciens has a streamlined genomic organization that may contribute to its adaptability in various environments. The accession number for this strain is FQYR00000000.1, which can be used for further genomic studies and comparisons with related microorganisms. The ecological implications of Rubritalea squalenifaciens may be significant, as its aerobic nature suggests a role in environments where oxygen is readily available. This could include soil and aquatic ecosystems, where it may participate in biogeochemical cycles or contribute to the breakdown of organic matter. Understanding its specific ecological niche and interactions with other microorganisms could provide insights into its function and importance in microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassVerrucomicrobiia
OrderVerrucomicrobiales
FamilyRubritaleaceae
GenusRubritalea
SpeciesRubritalea squalenifaciens
StrainDSM 18772

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubritalea squalenifaciens DSM 18772 genome assembly, contig:

Gene Summary

Adenine Count

1004704 bp

Thymine Count

1070559 bp

Guanine Count

1217459 bp

Cytosine Count

1028416 bp

Genome Length

4322488 bp

Protein-coding Genes

3805 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN02745181_3601Not AvailableNegative3994390 - 399539436576.7
pa14 domain-containing proteinSAMN02745181_3602Not AvailableNegative3995437 - 3999378143316.0
Trna-tyrNot AvailableNot AvailablePositive4000038 - 4000123Not Available
epoxyqueuosine reductaseSAMN02745181_3604Not AvailablePositive4000300 - 400134039412.8
hypothetical proteinSAMN02745181_3605Not AvailableNegative4001373 - 400229334428.5
aspartate aminotransferaseSAMN02745181_3606Not AvailableNegative4002424 - 400359042829.2
ribosomal protein l11 methyltransferaseSAMN02745181_3607Not AvailableNegative4003777 - 400461631327.9
arylsulfatase aSAMN02745181_3608Not AvailableNegative4004732 - 400745895276.5
Trna-glyNot AvailableNot AvailablePositive4007666 - 4007740Not Available
Trna-glyNot AvailableNot AvailablePositive4007786 - 4007860Not Available

Displaying genes 3541 – 3550 of 3849 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.