Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2'-5' rna ligase | SAMN02745181_3579 | Not Available | Negative | 3977887 - 3978441 | 21013.4 |
| heavy metal sensor kinase | SAMN02745181_3580 | Not Available | Negative | 3978481 - 3980298 | 67567.2 |
| two-component system, ompr family, response regulator | SAMN02745181_3581 | Not Available | Negative | 3980305 - 3981081 | 28788.6 |
| gtpase sar1 family protein | SAMN02745181_3582 | Not Available | Negative | 3981129 - 3982835 | 64436.3 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN02745181_3583 | Not Available | Negative | 3982849 - 3983679 | 30658.7 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN02745181_3584 | Not Available | Positive | 3984080 - 3984703 | 22531.9 |
| rhodanese-related sulfurtransferase | SAMN02745181_3585 | Not Available | Positive | 3984707 - 3985060 | 13235.7 |
| solute carrier family 10 (sodium/bile acid cotransporter), member 7 | SAMN02745181_3586 | Not Available | Negative | 3985057 - 3986022 | 34625.1 |
| plasmid stabilization system protein pare | SAMN02745181_3587 | Not Available | Negative | 3986201 - 3986518 | 12584.8 |
| antitoxin pard | SAMN02745181_3588 | Not Available | Negative | 3986519 - 3986773 | 9381.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
