Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase (homohexameric) | SAMN02745181_3559 | Not Available | Positive | 3946321 - 3947196 | 32511.0 |
| superfamily ii dna or rna helicase, snf2 family | SAMN02745181_3560 | Not Available | Negative | 3947533 - 3951051 | 135212.0 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN02745181_3561 | Not Available | Negative | 3951295 - 3952146 | 31171.0 |
| formate-tetrahydrofolate ligase | SAMN02745181_3562 | Not Available | Negative | 3952198 - 3953868 | 59992.7 |
| oxidoreductase alpha (molybdopterin) subunit | SAMN02745181_3563 | Not Available | Positive | 3954022 - 3956295 | 84025.8 |
| hypothetical protein | SAMN02745181_3564 | Not Available | Negative | 3956160 - 3956447 | 10418.7 |
| acyl-coa thioester hydrolase | SAMN02745181_3565 | Not Available | Negative | 3956447 - 3956872 | 16182.4 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN02745181_3566 | Not Available | Negative | 3956970 - 3958217 | 43751.4 |
| hypothetical protein | SAMN02745181_3567 | Not Available | Negative | 3958270 - 3958512 | 9165.43 |
| hypothetical protein | SAMN02745181_3568 | Not Available | Negative | 3958505 - 3959281 | 29474.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
