Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallo-peptidase family m12b reprolysin-like | SAMN02745181_3348 | Not Available | Positive | 3684311 - 3688270 | 137960.0 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN02745181_3349 | Not Available | Positive | 3688695 - 3692600 | 136773.0 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN02745181_3350 | Not Available | Positive | 3692685 - 3693047 | 13083.1 |
| metallo-peptidase family m12b reprolysin-like | SAMN02745181_3351 | Not Available | Positive | 3693539 - 3697636 | 143299.0 |
| cation/acetate symporter | SAMN02745181_3352 | Not Available | Negative | 3697728 - 3699578 | 66542.3 |
| putative solute:sodium symporter small subunit | SAMN02745181_3353 | Not Available | Negative | 3699636 - 3699899 | 10038.4 |
| pep-cterm protein-sorting domain-containing protein/myxo-cterm domain-containing protein | SAMN02745181_3354 | Not Available | Positive | 3700121 - 3700936 | 27389.1 |
| membrane glycosyltransferase | SAMN02745181_3355 | Not Available | Negative | 3700991 - 3703114 | 80345.5 |
| hypothetical protein | SAMN02745181_3356 | Not Available | Negative | 3703125 - 3703730 | 23153.0 |
| glucans biosynthesis protein | SAMN02745181_3357 | Not Available | Negative | 3703706 - 3705241 | 58056.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
