Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase-like tim barrel | SAMN02745181_3317 | Not Available | Negative | 3644437 - 3645444 | 36688.0 |
| hypothetical protein | SAMN02745181_3318 | Not Available | Positive | 3645572 - 3645754 | 6781.89 |
| pas domain s-box-containing protein | SAMN02745181_3319 | Not Available | Negative | 3645695 - 3646429 | 27742.1 |
| hypothetical protein | SAMN02745181_3320 | Not Available | Negative | 3646508 - 3646687 | 6733.83 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN02745181_3321 | Not Available | Negative | 3646762 - 3647259 | 19165.0 |
| hypothetical protein | SAMN02745181_3322 | Not Available | Positive | 3647355 - 3647825 | 17795.8 |
| hypothetical protein | SAMN02745181_3323 | Not Available | Positive | 3647976 - 3648500 | 19035.4 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN02745181_3324 | Not Available | Positive | 3648514 - 3649995 | 54676.3 |
| hypothetical protein | SAMN02745181_3325 | Not Available | Positive | 3650067 - 3650720 | 25181.0 |
| abc1 family protein | SAMN02745181_3326 | Not Available | Positive | 3650720 - 3652051 | 50468.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
