Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN02745181_3307 | Not Available | Negative | 3625435 - 3626400 | 34264.2 |
| argininosuccinate lyase | SAMN02745181_3308 | Not Available | Negative | 3626554 - 3627909 | 49521.6 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN02745181_3309 | Not Available | Negative | 3628037 - 3631246 | 120198.0 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN02745181_3310 | Not Available | Negative | 3631353 - 3635486 | 153762.0 |
| n-acetylglucosamine-6-sulfatase | SAMN02745181_3311 | Not Available | Negative | 3635604 - 3637787 | 83518.3 |
| putative autoinducer-2 (ai-2) aldolase | SAMN02745181_3312 | Not Available | Negative | 3637912 - 3638793 | 31589.3 |
| dihydroxyacetone kinase | SAMN02745181_3313 | Not Available | Negative | 3638833 - 3640602 | 62218.6 |
| rhamnose utilisation protein rhad, predicted bifunctional aldolase and dehydrogenase | SAMN02745181_3314 | Not Available | Negative | 3640649 - 3642622 | 70673.1 |
| inosose dehydratase | SAMN02745181_3315 | Not Available | Negative | 3642718 - 3643563 | 31834.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN02745181_3316 | Not Available | Negative | 3643597 - 3644400 | 29341.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
