Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745181_3287 | Not Available | Negative | 3604323 - 3604790 | 17672.1 |
| squalene-hopene/tetraprenyl-beta-curcumene cyclase | SAMN02745181_3288 | Not Available | Negative | 3604889 - 3606043 | 43035.2 |
| hypothetical protein | SAMN02745181_3289 | Not Available | Negative | 3606056 - 3606874 | 30318.4 |
| sodium transport system atp-binding protein | SAMN02745181_3290 | Not Available | Positive | 3607002 - 3607751 | 27221.9 |
| sodium transport system permease protein | SAMN02745181_3291 | Not Available | Positive | 3607744 - 3608904 | 41701.0 |
| bile acid:na+ symporter, bass family | SAMN02745181_3292 | Not Available | Positive | 3608986 - 3609984 | 35744.0 |
| protein of unknown function | SAMN02745181_3293 | Not Available | Positive | 3610047 - 3610934 | 33916.8 |
| protein-tyrosine phosphatase | SAMN02745181_3294 | Not Available | Negative | 3610938 - 3611402 | 17353.5 |
| 23s rrna m(5)u-1939 methyltransferase | SAMN02745181_3295 | Not Available | Negative | 3611414 - 3612667 | 46784.6 |
| hypothetical protein | SAMN02745181_3296 | Not Available | Positive | 3612762 - 3613133 | 14767.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
