Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--fructose-6-phosphate transaminase | SAMN02745181_3246 | Not Available | Positive | 3558057 - 3559904 | 66786.9 |
| dna-binding transcriptional regulator, gntr family | SAMN02745181_3247 | Not Available | Negative | 3559906 - 3560955 | 40155.7 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_3248 | Not Available | Positive | 3561105 - 3561851 | 25648.9 |
| hypothetical protein | SAMN02745181_3249 | Not Available | Positive | 3562001 - 3562393 | 15354.5 |
| hypothetical protein | SAMN02745181_3250 | Not Available | Negative | 3562452 - 3563006 | 20334.3 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN02745181_3251 | Not Available | Negative | 3563025 - 3563756 | 27005.8 |
| enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-coa reductase (nad+) | SAMN02745181_3252 | Not Available | Negative | 3563831 - 3565027 | 43187.8 |
| hypothetical protein | SAMN02745181_3253 | Not Available | Negative | 3565117 - 3566079 | 37014.7 |
| hypothetical protein | SAMN02745181_3254 | Not Available | Positive | 3566270 - 3567673 | 51559.7 |
| small multidrug resistance pump | SAMN02745181_3255 | Not Available | Positive | 3567697 - 3568017 | 11379.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
