Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745181_0245 | Not Available | Negative | 249439 - 249570 | 4487.52 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN02745181_0246 | Not Available | Negative | 249700 - 250683 | 35534.8 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN02745181_0247 | Not Available | Negative | 250726 - 251802 | 39727.6 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN02745181_0248 | Not Available | Positive | 252123 - 253994 | 70338.2 |
| 4-oxalocrotonate tautomerase | SAMN02745181_0249 | Not Available | Positive | 254019 - 254222 | 7736.29 |
| hypothetical protein | SAMN02745181_0250 | Not Available | Positive | 254219 - 254593 | 14337.4 |
| acyl-coa thioester hydrolase | SAMN02745181_0251 | Not Available | Negative | 254658 - 255074 | 15820.4 |
| hypothetical protein | SAMN02745181_0252 | Not Available | Positive | 255181 - 257028 | 70330.8 |
| serine protease do | SAMN02745181_0253 | Not Available | Positive | 257116 - 258615 | 55170.7 |
| aaa domain-containing protein | SAMN02745181_0254 | Not Available | Positive | 258616 - 259161 | 21218.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
