Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yckc, rdd family | SAMN02745181_0235 | Not Available | Positive | 241895 - 242344 | 15878.3 |
| nadph:quinone reductase | SAMN02745181_0236 | Not Available | Negative | 242341 - 243324 | 36459.2 |
| glutamate dehydrogenase (nad(p)+) | SAMN02745181_0237 | Not Available | Negative | 243339 - 244601 | 46132.5 |
| protein of unknown function | SAMN02745181_0238 | Not Available | Negative | 244791 - 245198 | 14937.1 |
| hypothetical protein | SAMN02745181_0239 | Not Available | Positive | 245371 - 245925 | 20616.4 |
| hypothetical protein | SAMN02745181_0240 | Not Available | Negative | 245945 - 246130 | 6872.62 |
| rep element-mobilizing transposase rayt | SAMN02745181_0241 | Not Available | Negative | 246372 - 246812 | 16736.7 |
| hypothetical protein | SAMN02745181_0242 | Not Available | Negative | 246977 - 247288 | 11312.5 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN02745181_0243 | Not Available | Negative | 247386 - 248660 | 43902.7 |
| hypothetical protein | SAMN02745181_0244 | Not Available | Negative | 248878 - 249234 | 12599.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
