Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN02745181_0144 | Not Available | Negative | 141259 - 142719 | 54234.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02745181_0145 | Not Available | Negative | 142716 - 143324 | 23194.6 |
| mannosyl-3-phosphoglycerate phosphatase | SAMN02745181_0146 | Not Available | Positive | 143504 - 144340 | 30531.0 |
| glycosidase | SAMN02745181_0147 | Not Available | Positive | 144348 - 147341 | 114098.0 |
| hypothetical protein | SAMN02745181_0148 | Not Available | Negative | 147382 - 148005 | 22859.2 |
| glucuronate isomerase | SAMN02745181_0149 | Not Available | Negative | 148182 - 149603 | 53175.0 |
| l-2-hydroxycarboxylate dehydrogenase (nad+) | SAMN02745181_0150 | Not Available | Negative | 149646 - 150749 | 39506.6 |
| gluconokinase | SAMN02745181_0151 | Not Available | Negative | 150727 - 151209 | 17320.4 |
| d-3-phosphoglycerate dehydrogenase | SAMN02745181_0152 | Not Available | Negative | 151278 - 152252 | 34694.2 |
| laci family transcriptional regulator | SAMN02745181_0153 | Not Available | Positive | 152342 - 153472 | 41152.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
