Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745181_0125 | Not Available | Positive | 120717 - 120860 | 4869.96 |
| lysophospholipase l1 | SAMN02745181_0126 | Not Available | Positive | 121151 - 123268 | 78596.1 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN02745181_0127 | Not Available | Positive | 123276 - 123932 | 24746.6 |
| hypothetical protein | SAMN02745181_0128 | Not Available | Positive | 124003 - 124338 | 12026.9 |
| hypothetical protein | SAMN02745181_0129 | Not Available | Negative | 124421 - 125137 | 26300.9 |
| nad-binding of nadp-dependent 3-hydroxyisobutyrate dehydrogenase | SAMN02745181_0130 | Not Available | Negative | 125142 - 126029 | 31191.0 |
| dna-3-methyladenine glycosylase i | SAMN02745181_0131 | Not Available | Positive | 126119 - 126682 | 21952.0 |
| hypothetical protein | SAMN02745181_0132 | Not Available | Negative | 127226 - 128356 | 42549.4 |
| pp_00108 | SAMN02745181_0133 | Not Available | Negative | 128598 - 129629 | Not Available |
| peptide-methionine (r)-s-oxide reductase | SAMN02745181_0134 | Not Available | Positive | 129945 - 130508 | 20964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
