Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-diphospho-sugar transferase | SAMN02745181_1034 | Not Available | Negative | 1036163 - 1036822 | 26241.5 |
| hypothetical protein | SAMN02745181_1035 | Not Available | Negative | 1036865 - 1037644 | 29609.9 |
| hypothetical protein | SAMN02745181_1036 | Not Available | Negative | 1037660 - 1038220 | 21129.5 |
| kdo transferase-3 | SAMN02745181_1037 | Not Available | Negative | 1038273 - 1039286 | 37367.6 |
| lipopolysaccharide kinase (kdo/waap) family protein | SAMN02745181_1038 | Not Available | Positive | 1039425 - 1040039 | 23404.5 |
| polysaccharide pyruvyl transferase family protein wcak | SAMN02745181_1039 | Not Available | Negative | 1040036 - 1041211 | 43045.2 |
| udp-glucose:(heptosyl)lps alpha-1,3-glucosyltransferase | SAMN02745181_1040 | Not Available | Negative | 1041242 - 1042411 | 43742.6 |
| heptose i phosphotransferase | SAMN02745181_1041 | Not Available | Positive | 1042459 - 1043301 | 32000.8 |
| trna a-37 threonylcarbamoyl transferase component bud32 | SAMN02745181_1042 | Not Available | Negative | 1043231 - 1043845 | 23128.9 |
| hypothetical protein | SAMN02745181_1043 | Not Available | Positive | 1043925 - 1044905 | 37053.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
