Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Rubritaleaceae
Genus
Rubritalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Verrucomicrobiia |
| Order | Verrucomicrobiales |
| Family | Rubritaleaceae |
| Genus | Rubritalea |
| Species | Rubritalea squalenifaciens |
| Strain | DSM 18772 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1004704 bp
Thymine Count
1070559 bp
Guanine Count
1217459 bp
Cytosine Count
1028416 bp
Genome Length
4322488 bp
Protein-coding Genes
3805 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_0115 | Not Available | Positive | 109368 - 110087 | 24612.4 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745181_0116 | Not Available | Positive | 110533 - 111249 | 24504.9 |
| tryptophan halogenase | SAMN02745181_0117 | Not Available | Negative | 111374 - 112891 | 56628.8 |
| opacity protein | SAMN02745181_0118 | Not Available | Positive | 113036 - 113683 | 23771.5 |
| opacity protein | SAMN02745181_0119 | Not Available | Positive | 113800 - 114453 | 24157.1 |
| opacity protein | SAMN02745181_0120 | Not Available | Positive | 114611 - 115258 | 24101.0 |
| dna polymerase-3 subunit alpha | SAMN02745181_0121 | Not Available | Positive | 115496 - 118996 | 130511.0 |
| ribosome-associated heat shock protein hsp15 | SAMN02745181_0122 | Not Available | Positive | 119003 - 119428 | 16284.5 |
| putative dna-binding domain-containing protein | SAMN02745181_0123 | Not Available | Negative | 119423 - 119893 | 17355.8 |
| hypothetical protein | SAMN02745181_0124 | Not Available | Negative | 119980 - 120216 | 8018.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
