Clostridium collagenovorans DSM 3089

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium collagenovorans DSM 3089 is an anaerobic bacterium known for its specialized metabolic capabilities. It possesses a single replicon, which contributes to its genomic stability and replication efficiency under anaerobic conditions. The organism is classified under the genus Clostridium, which is characterized by its ability to thrive in environments devoid of oxygen. The strain has been assigned the accession number FQXP00000000.1, indicating that its genomic sequence is available for further study and analysis. This information is crucial for researchers interested in the genetic characteristics and potential applications of C. collagenovorans in various fields, including biotechnology and environmental microbiology. C. collagenovorans plays a significant role in the degradation of collagen and other complex organic compounds, which highlights its potential in bioremediation processes and in the treatment of waste containing high levels of organic matter. Its anaerobic lifestyle allows it to occupy ecological niches where oxygen is limited, contributing to nutrient cycling in anaerobic environments. Understanding the metabolic pathways and ecological functions of C. collagenovorans could provide insights into its applications in industrial processes and environmental management, particularly in the context of organic waste treatment and collagen degradation. The study of this organism underscores the importance of anaerobic microorganisms in maintaining ecosystem balance and recycling nutrients in anoxic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium collagenovorans
StrainDSM 3089

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium collagenovorans DSM 3089 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)h-flavin reductaseSAMN02745196_00456Not AvailablePositive462053 - 46306938141.7
glucose inhibited division protein aSAMN02745196_00457Not AvailablePositive463069 - 46435246815.8
hypothetical proteinSAMN02745196_00458Not AvailablePositive464502 - 46592356409.2
tm2 domain-containing proteinSAMN02745196_00459Not AvailablePositive466053 - 46661321343.0
benzoyl-coa reductase/2-hydroxyglutaryl-coa dehydratase subunit, bcrc/badd/hgdbSAMN02745196_00460Not AvailableNegative466672 - 46782043149.9
ppgpp synthetase catalytic domain-containing protein (rela/spot-type nucleotidyltranferase)SAMN02745196_00461Not AvailablePositive468262 - 46910133173.5
tyrosyl-trna synthetaseSAMN02745196_00463Not AvailablePositive469615 - 47082045569.6
trna pseudouridine38-40 synthaseSAMN02745196_00464Not AvailablePositive471106 - 47184628322.4
basic amino acid/polyamine antiporter, apa familySAMN02745196_00465Not AvailablePositive472317 - 47365448125.8
tellurite resistance protein tercSAMN02745196_00466Not AvailablePositive474010 - 47482230664.3

Displaying genes 491 – 500 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.