Clostridium collagenovorans DSM 3089

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium collagenovorans DSM 3089 is an anaerobic bacterium known for its specialized metabolic capabilities. It possesses a single replicon, which contributes to its genomic stability and replication efficiency under anaerobic conditions. The organism is classified under the genus Clostridium, which is characterized by its ability to thrive in environments devoid of oxygen. The strain has been assigned the accession number FQXP00000000.1, indicating that its genomic sequence is available for further study and analysis. This information is crucial for researchers interested in the genetic characteristics and potential applications of C. collagenovorans in various fields, including biotechnology and environmental microbiology. C. collagenovorans plays a significant role in the degradation of collagen and other complex organic compounds, which highlights its potential in bioremediation processes and in the treatment of waste containing high levels of organic matter. Its anaerobic lifestyle allows it to occupy ecological niches where oxygen is limited, contributing to nutrient cycling in anaerobic environments. Understanding the metabolic pathways and ecological functions of C. collagenovorans could provide insights into its applications in industrial processes and environmental management, particularly in the context of organic waste treatment and collagen degradation. The study of this organism underscores the importance of anaerobic microorganisms in maintaining ecosystem balance and recycling nutrients in anoxic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium collagenovorans
StrainDSM 3089

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium collagenovorans DSM 3089 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN02745196_00406Not AvailableNegative416695 - 41748629849.5
predicted component of the ribosome quality control (rqc) complex, yloa/tae2 family, contains fibronectin-binding (fbpa) and duf814 domainsSAMN02745196_00407Not AvailableNegative417571 - 41928365317.0
diaminopimelate epimeraseSAMN02745196_00408Not AvailablePositive419497 - 42032130199.6
type iv pilus assembly protein pilbSAMN02745196_00409Not AvailablePositive420607 - 42213658342.6
type ii secretion system protein f (gspf)SAMN02745196_00410Not AvailablePositive422147 - 42333445126.4
prepilin-type n-terminal cleavage/methylation domain-containing proteinSAMN02745196_00411Not AvailablePositive423344 - 42376916281.0
prepilin-type n-terminal cleavage/methylation domain-containing proteinSAMN02745196_00412Not AvailablePositive423788 - 42422816830.7
prepilin-type n-terminal cleavage/methylation domain-containing proteinSAMN02745196_00413Not AvailablePositive424225 - 42466816859.9
hypothetical proteinSAMN02745196_00414Not AvailablePositive424644 - 42509017817.5
hypothetical proteinSAMN02745196_00415Not AvailablePositive425091 - 42578927797.8

Displaying genes 441 – 450 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.