Clostridium collagenovorans DSM 3089

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium collagenovorans DSM 3089 is an anaerobic bacterium known for its specialized metabolic capabilities. It possesses a single replicon, which contributes to its genomic stability and replication efficiency under anaerobic conditions. The organism is classified under the genus Clostridium, which is characterized by its ability to thrive in environments devoid of oxygen. The strain has been assigned the accession number FQXP00000000.1, indicating that its genomic sequence is available for further study and analysis. This information is crucial for researchers interested in the genetic characteristics and potential applications of C. collagenovorans in various fields, including biotechnology and environmental microbiology. C. collagenovorans plays a significant role in the degradation of collagen and other complex organic compounds, which highlights its potential in bioremediation processes and in the treatment of waste containing high levels of organic matter. Its anaerobic lifestyle allows it to occupy ecological niches where oxygen is limited, contributing to nutrient cycling in anaerobic environments. Understanding the metabolic pathways and ecological functions of C. collagenovorans could provide insights into its applications in industrial processes and environmental management, particularly in the context of organic waste treatment and collagen degradation. The study of this organism underscores the importance of anaerobic microorganisms in maintaining ecosystem balance and recycling nutrients in anoxic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium collagenovorans
StrainDSM 3089

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium collagenovorans DSM 3089 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
7-alpha-hydroxysteroid dehydrogenaseSAMN02745196_00173Not AvailablePositive167179 - 16792226354.8
ribosomal small subunit pseudouridine synthase aSAMN02745196_00174Not AvailablePositive168400 - 16918530056.8
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN02745196_00175Not AvailablePositive169373 - 17004425678.4
signal transduction histidine kinaseSAMN02745196_00176Not AvailablePositive170046 - 17105939092.3
putative abc transport system atp-binding proteinSAMN02745196_00177Not AvailablePositive171180 - 17194728027.8
putative abc transport system permease proteinSAMN02745196_00178Not AvailablePositive171940 - 17388673651.6
hypothetical proteinSAMN02745196_00179Not AvailablePositive174238 - 17461214280.2
excinuclease abc, a subunitSAMN02745196_00180Not AvailablePositive175289 - 17755384619.5
protein of unknown functionSAMN02745196_00181Not AvailableNegative177795 - 17832219857.9
leucine rich repeat-containing proteinSAMN02745196_00182Not AvailablePositive179286 - 181976101085.0

Displaying genes 211 – 220 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.