Clostridium collagenovorans DSM 3089

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium collagenovorans DSM 3089 is an anaerobic bacterium known for its specialized metabolic capabilities. It possesses a single replicon, which contributes to its genomic stability and replication efficiency under anaerobic conditions. The organism is classified under the genus Clostridium, which is characterized by its ability to thrive in environments devoid of oxygen. The strain has been assigned the accession number FQXP00000000.1, indicating that its genomic sequence is available for further study and analysis. This information is crucial for researchers interested in the genetic characteristics and potential applications of C. collagenovorans in various fields, including biotechnology and environmental microbiology. C. collagenovorans plays a significant role in the degradation of collagen and other complex organic compounds, which highlights its potential in bioremediation processes and in the treatment of waste containing high levels of organic matter. Its anaerobic lifestyle allows it to occupy ecological niches where oxygen is limited, contributing to nutrient cycling in anaerobic environments. Understanding the metabolic pathways and ecological functions of C. collagenovorans could provide insights into its applications in industrial processes and environmental management, particularly in the context of organic waste treatment and collagen degradation. The study of this organism underscores the importance of anaerobic microorganisms in maintaining ecosystem balance and recycling nutrients in anoxic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium collagenovorans
StrainDSM 3089

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium collagenovorans DSM 3089 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative hydrolase of the had superfamilySAMN02745196_00113Not AvailablePositive98291 - 9898026821.2
peptidyl-prolyl cis-trans isomerase b (cyclophilin b)SAMN02745196_00114Not AvailableNegative99133 - 9991828568.9
alanine or glycine:cation symporter, agcs familySAMN02745196_00115Not AvailablePositive101029 - 10241749065.5
phosphoribosylformylglycinamidine synthaseSAMN02745196_00116Not AvailablePositive102731 - 106504138918.0
5-(carboxyamino)imidazole ribonucleotide mutaseSAMN02745196_00117Not AvailablePositive107112 - 10759117069.2
phosphoribosylaminoimidazole-succinocarboxamide synthaseSAMN02745196_00118Not AvailablePositive107591 - 10829826794.3
amidophosphoribosyltransferaseSAMN02745196_00119Not AvailablePositive108849 - 11028851939.4
phosphoribosylformylglycinamidine cyclo-ligaseSAMN02745196_00120Not AvailablePositive110320 - 11131835815.3
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferaseSAMN02745196_00121Not AvailablePositive111306 - 11191722138.1
imp cyclohydrolaseSAMN02745196_00122Not AvailablePositive111934 - 11343355646.7

Displaying genes 151 – 160 of 3058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.