Massilia sp. CF038

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Massilia sp. CF038 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a straightforward genomic structure that may influence its replication and genetic stability. The strain is cataloged under the accession number FQWU00000000.1, facilitating its identification and further study within microbial databases. Massilia species are often found in various environmental niches, including soil and aquatic systems, suggesting that Massilia sp. CF038 may play a role in nutrient cycling and ecosystem dynamics. While specific ecological functions of this strain have not been detailed, Gram-negative bacteria like those in the Massilia genus are typically involved in biogeochemical processes, including the degradation of organic matter and involvement in the nitrogen cycle. The presence of Massilia sp. CF038 in diverse environments underscores its potential importance in microbial communities, contributing to ecological interactions and possibly influencing the health and stability of ecosystems. Understanding the specific roles and interactions of this bacterium could provide insights into its ecological significance and potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia sp. CF038
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia sp. CF038
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia sp. CF038 genome assembly, contig: Ga0115467_114, whole

Gene Summary

Adenine Count

1081008 bp

Thymine Count

1083242 bp

Guanine Count

1751203 bp

Cytosine Count

1748531 bp

Genome Length

5664349 bp

Protein-coding Genes

5083 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05428948_0019Not AvailablePositive17313 - 1852741830.5
phenylacetic acid degradation proteinSAMN05428948_0020Not AvailablePositive18537 - 1913321455.3
oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenaseSAMN05428948_0021Not AvailablePositive19153 - 2121973377.4
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05428948_0022Not AvailableNegative21447 - 2363380262.3
uncharacterized conserved protein, duf1501 familySAMN05428948_0023Not AvailableNegative23674 - 2507448985.1
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive26642 - 2675418.01
uncharacterized conserved protein, duf1800 familySAMN05428948_0024Not AvailableNegative25084 - 2680261355.4
xaa-pro dipeptidaseSAMN05428948_0025Not AvailableNegative27138 - 2837644466.2
trap transporter, dctm subunitSAMN05428948_0026Not AvailableNegative28388 - 3007359631.7
trap-type mannitol/chloroaromatic compound transport system, small permease componentSAMN05428948_0027Not AvailableNegative30082 - 3066021363.5

Displaying genes 21 – 30 of 5153 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.