Spongiibacterium flavum strain DSM 22638

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flagellimonas

Description

Spongiibacterium flavum strain DSM 22638 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been cataloged with a single replicon, indicating a relatively straightforward genetic structure. The genomic information for Spongiibacterium flavum strain DSM 22638 can be accessed under the accession number FQWL00000000.1. The classification of Spongiibacterium flavum within the broader context of microbiology highlights its potential ecological roles, particularly in marine environments where such bacteria are often found. Gram-negative bacteria are known for their diverse metabolic pathways, which can contribute to nutrient cycling and the degradation of organic matter in aquatic ecosystems. The specific traits of Spongiibacterium flavum may provide insights into its ecological functions, such as its interactions with other microorganisms and its role in biogeochemical processes. Understanding the characteristics of Spongiibacterium flavum strain DSM 22638 can enhance our knowledge of microbial diversity and the functional roles that these bacteria play in their natural habitats. This knowledge is crucial for appreciating how microbial communities contribute to ecosystem stability and resilience.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlagellimonas
SpeciesFlagellimonas flava
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spongiibacterium flavum strain DSM 22638 genome assembly, contig:

Gene Summary

Adenine Count

1110789 bp

Thymine Count

1114424 bp

Guanine Count

803565 bp

Cytosine Count

807385 bp

Genome Length

3836163 bp

Protein-coding Genes

3507 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04488116_0068Not AvailableNegative63745 - 639337247.35
predicted phosphohydrolase, cof family, had superfamilySAMN04488116_0069Not AvailablePositive63973 - 6435914480.5
branched-chain amino acid aminotransferaseSAMN04488116_0070Not AvailableNegative64388 - 6545539498.6
trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmcSAMN04488116_0071Not AvailablePositive65598 - 6631127201.8
hypothetical proteinSAMN04488116_0072Not AvailablePositive66437 - 6739935515.7
molecular chaperone grpeSAMN04488116_0073Not AvailablePositive67525 - 6809721468.7
molecular chaperone dnajSAMN04488116_0074Not AvailablePositive68104 - 6921940034.5
abc-2 type transport system atp-binding proteinSAMN04488116_0075Not AvailablePositive69409 - 7034735594.6
abc-2 type transport system permease proteinSAMN04488116_0076Not AvailablePositive70337 - 7168049526.1
mechanosensitive ion channelSAMN04488116_0077Not AvailablePositive71685 - 7258433865.7

Displaying genes 71 – 80 of 3557 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.