Spongiibacterium flavum strain DSM 22638

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flagellimonas

Description

Spongiibacterium flavum strain DSM 22638 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been cataloged with a single replicon, indicating a relatively straightforward genetic structure. The genomic information for Spongiibacterium flavum strain DSM 22638 can be accessed under the accession number FQWL00000000.1. The classification of Spongiibacterium flavum within the broader context of microbiology highlights its potential ecological roles, particularly in marine environments where such bacteria are often found. Gram-negative bacteria are known for their diverse metabolic pathways, which can contribute to nutrient cycling and the degradation of organic matter in aquatic ecosystems. The specific traits of Spongiibacterium flavum may provide insights into its ecological functions, such as its interactions with other microorganisms and its role in biogeochemical processes. Understanding the characteristics of Spongiibacterium flavum strain DSM 22638 can enhance our knowledge of microbial diversity and the functional roles that these bacteria play in their natural habitats. This knowledge is crucial for appreciating how microbial communities contribute to ecosystem stability and resilience.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlagellimonas
SpeciesFlagellimonas flava
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spongiibacterium flavum strain DSM 22638 genome assembly, contig:

Gene Summary

Adenine Count

1110789 bp

Thymine Count

1114424 bp

Guanine Count

803565 bp

Cytosine Count

807385 bp

Genome Length

3836163 bp

Protein-coding Genes

3507 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-citramalate synthaseSAMN04488116_0688Not AvailableNegative745772 - 74728956408.3
3-isopropylmalate/(r)-2-methylmalate dehydratase small subunitSAMN04488116_0689Not AvailableNegative747347 - 74794322415.3
3-isopropylmalate/(r)-2-methylmalate dehydratase large subunitSAMN04488116_0690Not AvailableNegative747984 - 74939350877.5
protein of unknown functionSAMN04488116_0691Not AvailablePositive749807 - 75091940669.0
atp-dependent dna helicase recgSAMN04488116_0692Not AvailableNegative750975 - 75308079967.9
aminopeptidase nSAMN04488116_0693Not AvailablePositive753127 - 75530483750.3
patatin-like phospholipaseSAMN04488116_0694Not AvailablePositive755301 - 75621534630.5
hypothetical proteinSAMN04488116_0695Not AvailableNegative756219 - 75673719828.9
hypothetical proteinSAMN04488116_0696Not AvailableNegative756826 - 75759927882.0
glutamate synthase domain-containing protein 2SAMN04488116_0697Not AvailableNegative757632 - 75919457701.3

Displaying genes 691 – 700 of 3557 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.