Spongiibacterium flavum strain DSM 22638

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flagellimonas

Description

Spongiibacterium flavum strain DSM 22638 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been cataloged with a single replicon, indicating a relatively straightforward genetic structure. The genomic information for Spongiibacterium flavum strain DSM 22638 can be accessed under the accession number FQWL00000000.1. The classification of Spongiibacterium flavum within the broader context of microbiology highlights its potential ecological roles, particularly in marine environments where such bacteria are often found. Gram-negative bacteria are known for their diverse metabolic pathways, which can contribute to nutrient cycling and the degradation of organic matter in aquatic ecosystems. The specific traits of Spongiibacterium flavum may provide insights into its ecological functions, such as its interactions with other microorganisms and its role in biogeochemical processes. Understanding the characteristics of Spongiibacterium flavum strain DSM 22638 can enhance our knowledge of microbial diversity and the functional roles that these bacteria play in their natural habitats. This knowledge is crucial for appreciating how microbial communities contribute to ecosystem stability and resilience.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlagellimonas
SpeciesFlagellimonas flava
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spongiibacterium flavum strain DSM 22638 genome assembly, contig:

Gene Summary

Adenine Count

1110789 bp

Thymine Count

1114424 bp

Guanine Count

803565 bp

Cytosine Count

807385 bp

Genome Length

3836163 bp

Protein-coding Genes

3507 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04488116_0426Not AvailableNegative479777 - 48030720365.5
rna polymerase sigma-70 factor, ecf subfamilySAMN04488116_0427Not AvailableNegative480341 - 48088321056.2
atp-binding cassette, subfamily b, msbaSAMN04488116_0428Not AvailableNegative481107 - 48293068132.3
phosphoglucomutaseSAMN04488116_0429Not AvailableNegative482934 - 48464062852.6
glycosyltransferase involved in cell wall bisynthesisSAMN04488116_0430Not AvailableNegative484700 - 48564735845.6
protein of unknown functionSAMN04488116_0431Not AvailableNegative485690 - 48621118944.7
lsu ribosomal protein l31pSAMN04488116_0432Not AvailablePositive486372 - 48664110265.3
udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferaseSAMN04488116_0433Not AvailablePositive486722 - 48789743410.5
threonylcarbamoyladenosine trna methylthiotransferase mtabSAMN04488116_0434Not AvailablePositive487985 - 48931350142.6
hypothetical proteinSAMN04488116_0435Not AvailableNegative489361 - 48965411430.9

Displaying genes 431 – 440 of 3557 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.