Spongiibacterium flavum strain DSM 22638

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flagellimonas

Description

Spongiibacterium flavum strain DSM 22638 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain has been cataloged with a single replicon, indicating a relatively straightforward genetic structure. The genomic information for Spongiibacterium flavum strain DSM 22638 can be accessed under the accession number FQWL00000000.1. The classification of Spongiibacterium flavum within the broader context of microbiology highlights its potential ecological roles, particularly in marine environments where such bacteria are often found. Gram-negative bacteria are known for their diverse metabolic pathways, which can contribute to nutrient cycling and the degradation of organic matter in aquatic ecosystems. The specific traits of Spongiibacterium flavum may provide insights into its ecological functions, such as its interactions with other microorganisms and its role in biogeochemical processes. Understanding the characteristics of Spongiibacterium flavum strain DSM 22638 can enhance our knowledge of microbial diversity and the functional roles that these bacteria play in their natural habitats. This knowledge is crucial for appreciating how microbial communities contribute to ecosystem stability and resilience.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlagellimonas
SpeciesFlagellimonas flava
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spongiibacterium flavum strain DSM 22638 genome assembly, contig:

Gene Summary

Adenine Count

1110789 bp

Thymine Count

1114424 bp

Guanine Count

803565 bp

Cytosine Count

807385 bp

Genome Length

3836163 bp

Protein-coding Genes

3507 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-seryl-trna(ser) seleniumtransferaseSAMN04488116_0306Not AvailableNegative324256 - 32547044096.5
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN04488116_0307Not AvailableNegative325491 - 32595816705.2
regulator of rnase e activity rraaSAMN04488116_0308Not AvailableNegative326007 - 32696035788.2
bile acid:na+ symporter, bass familySAMN04488116_0309Not AvailableNegative326947 - 32806239835.4
dihydroorotaseSAMN04488116_0310Not AvailableNegative328080 - 32935146342.4
glucose/arabinose dehydrogenase, beta-propeller foldSAMN04488116_0311Not AvailableNegative329411 - 33119866211.7
carbohydrate-binding family 9SAMN04488116_0312Not AvailableNegative331551 - 33227928054.2
arac-type dna-binding proteinSAMN04488116_0313Not AvailableNegative332332 - 33320133331.5
4-hydroxy-tetrahydrodipicolinate synthaseSAMN04488116_0314Not AvailablePositive333311 - 33423433761.1
nadp-dependent aldehyde dehydrogenaseSAMN04488116_0315Not AvailablePositive334235 - 33575853683.0

Displaying genes 311 – 320 of 3557 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.