Arenibacter palladensis strain DSM 17539

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Arenibacter

Description

Arenibacter palladensis strain DSM 17539 is a Gram-negative, aerobic, motile bacterium characterized by its rod shape. This strain is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. Arenibacter palladensis is non-spore-forming and possesses a single replicon. The absence of spores suggests that the bacterium may have specific survival strategies in its environmental niche rather than relying on sporulation for resilience. The strain is cataloged under accession number FQUX00000000.1, which provides a reference for further genetic and genomic study. Ecologically, the traits of Arenibacter palladensis suggest its potential role in various environments, likely thriving in habitats that maintain moderate temperatures and provide sufficient oxygen. Its motility may facilitate interactions with other microorganisms or substrates, enhancing its role in nutrient cycling or biogeochemical processes. The specific aerobic requirement also indicates that it may participate in aerobic decomposition processes, contributing to the breakdown of organic materials in its ecosystem. Overall, the characteristics of Arenibacter palladensis strain DSM 17539 highlight its adaptability and potential ecological significance in mesophilic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusArenibacter
SpeciesArenibacter palladensis
Strainstrain DSM 17539

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenibacter palladensis strain DSM 17539 genome assembly, contig:

Gene Summary

Adenine Count

1677334 bp

Thymine Count

1668903 bp

Guanine Count

1088995 bp

Cytosine Count

1109581 bp

Genome Length

5551910 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone htpgSAMN03080594_11322Not AvailableNegative5330332 - 533221871549.6
3-oxoacyl-[acyl-carrier-protein] synthase-3SAMN03080594_11323Not AvailablePositive5332492 - 533350236938.1
dna replication and repair protein recrSAMN03080594_11324Not AvailablePositive5334337 - 533495422783.7
2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase)SAMN03080594_11325Not AvailablePositive5335053 - 533644750480.2
dna polymerase-3 subunit epsilonSAMN03080594_11326Not AvailablePositive5336655 - 533743129510.5
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN03080594_11327Not AvailablePositive5337531 - 533814223071.7
hpt domain-containing proteinSAMN03080594_11328Not AvailablePositive5338180 - 533848211561.2
nicotinamide-nucleotide amidaseSAMN03080594_11329Not AvailablePositive5338482 - 533972945108.8
lsu ribosomal protein l28pSAMN03080594_11330Not AvailablePositive5339802 - 53400388933.09
lsu ribosomal protein l33pSAMN03080594_11331Not AvailablePositive5340060 - 53402427028.78

Displaying genes 4441 – 4450 of 4616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.