Arenibacter palladensis strain DSM 17539

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Arenibacter

Description

Arenibacter palladensis strain DSM 17539 is a Gram-negative, aerobic, motile bacterium characterized by its rod shape. This strain is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. Arenibacter palladensis is non-spore-forming and possesses a single replicon. The absence of spores suggests that the bacterium may have specific survival strategies in its environmental niche rather than relying on sporulation for resilience. The strain is cataloged under accession number FQUX00000000.1, which provides a reference for further genetic and genomic study. Ecologically, the traits of Arenibacter palladensis suggest its potential role in various environments, likely thriving in habitats that maintain moderate temperatures and provide sufficient oxygen. Its motility may facilitate interactions with other microorganisms or substrates, enhancing its role in nutrient cycling or biogeochemical processes. The specific aerobic requirement also indicates that it may participate in aerobic decomposition processes, contributing to the breakdown of organic materials in its ecosystem. Overall, the characteristics of Arenibacter palladensis strain DSM 17539 highlight its adaptability and potential ecological significance in mesophilic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusArenibacter
SpeciesArenibacter palladensis
Strainstrain DSM 17539

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenibacter palladensis strain DSM 17539 genome assembly, contig:

Gene Summary

Adenine Count

1677334 bp

Thymine Count

1668903 bp

Guanine Count

1088995 bp

Cytosine Count

1109581 bp

Genome Length

5551910 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin reductase (nadph)SAMN03080594_11195Not AvailableNegative5127631 - 512862337366.9
ribulose-phosphate 3-epimeraseSAMN03080594_11196Not AvailableNegative5128623 - 512928223956.0
atp-dependent rna helicase rhleSAMN03080594_11197Not AvailableNegative5129394 - 513062946063.1
uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domainsSAMN03080594_11198Not AvailablePositive5131101 - 513207535762.9
radical sam superfamily enzyme ygiq, upf0313 familySAMN03080594_11199Not AvailableNegative5132307 - 513439479099.7
rna polymerase primary sigma factorSAMN03080594_111100Not AvailableNegative5134770 - 513563332869.5
polyribonucleotide nucleotidyltransferaseSAMN03080594_111101Not AvailableNegative5135820 - 513803981499.7
small subunit ribosomal protein s15SAMN03080594_111102Not AvailableNegative5138268 - 513853710477.0
hypothetical proteinSAMN03080594_111103Not AvailablePositive5138562 - 51387688192.19
hypothetical proteinSAMN03080594_111104Not AvailablePositive5138787 - 513964731068.1

Displaying genes 4251 – 4260 of 4616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.