Arenibacter palladensis strain DSM 17539

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Arenibacter

Description

Arenibacter palladensis strain DSM 17539 is a Gram-negative, aerobic, motile bacterium characterized by its rod shape. This strain is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. Arenibacter palladensis is non-spore-forming and possesses a single replicon. The absence of spores suggests that the bacterium may have specific survival strategies in its environmental niche rather than relying on sporulation for resilience. The strain is cataloged under accession number FQUX00000000.1, which provides a reference for further genetic and genomic study. Ecologically, the traits of Arenibacter palladensis suggest its potential role in various environments, likely thriving in habitats that maintain moderate temperatures and provide sufficient oxygen. Its motility may facilitate interactions with other microorganisms or substrates, enhancing its role in nutrient cycling or biogeochemical processes. The specific aerobic requirement also indicates that it may participate in aerobic decomposition processes, contributing to the breakdown of organic materials in its ecosystem. Overall, the characteristics of Arenibacter palladensis strain DSM 17539 highlight its adaptability and potential ecological significance in mesophilic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusArenibacter
SpeciesArenibacter palladensis
Strainstrain DSM 17539

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenibacter palladensis strain DSM 17539 genome assembly, contig:

Gene Summary

Adenine Count

1677334 bp

Thymine Count

1668903 bp

Guanine Count

1088995 bp

Cytosine Count

1109581 bp

Genome Length

5551910 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na+-transporting nadh:ubiquinone oxidoreductase subunit cSAMN03080594_106139Not AvailableNegative3921385 - 392213727611.7
na+-transporting nadh:ubiquinone oxidoreductase subunit bSAMN03080594_106140Not AvailableNegative3922140 - 392340846021.8
na+-transporting nadh:ubiquinone oxidoreductase subunit aSAMN03080594_106141Not AvailableNegative3923413 - 392476549668.1
protein of unknown functionSAMN03080594_106142Not AvailablePositive3924915 - 392615948345.6
glycerophosphoryl diester phosphodiesteraseSAMN03080594_106143Not AvailablePositive3926386 - 392726133717.6
alpha-d-xyloside xylohydrolaseSAMN03080594_106144Not AvailableNegative3927304 - 392907968547.2
php domain-containing proteinSAMN03080594_106145Not AvailableNegative3929076 - 393050955706.0
4-hydroxy-tetrahydrodipicolinate synthaseSAMN03080594_106146Not AvailableNegative3930614 - 393154034123.9
arac-type dna-binding proteinSAMN03080594_106147Not AvailablePositive3931845 - 393269332687.2
hypothetical proteinSAMN03080594_106148Not AvailableNegative3932858 - 393351724318.7

Displaying genes 3301 – 3310 of 4616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.