Arenibacter palladensis strain DSM 17539

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Arenibacter

Description

Arenibacter palladensis strain DSM 17539 is a Gram-negative, aerobic, motile bacterium characterized by its rod shape. This strain is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. Arenibacter palladensis is non-spore-forming and possesses a single replicon. The absence of spores suggests that the bacterium may have specific survival strategies in its environmental niche rather than relying on sporulation for resilience. The strain is cataloged under accession number FQUX00000000.1, which provides a reference for further genetic and genomic study. Ecologically, the traits of Arenibacter palladensis suggest its potential role in various environments, likely thriving in habitats that maintain moderate temperatures and provide sufficient oxygen. Its motility may facilitate interactions with other microorganisms or substrates, enhancing its role in nutrient cycling or biogeochemical processes. The specific aerobic requirement also indicates that it may participate in aerobic decomposition processes, contributing to the breakdown of organic materials in its ecosystem. Overall, the characteristics of Arenibacter palladensis strain DSM 17539 highlight its adaptability and potential ecological significance in mesophilic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusArenibacter
SpeciesArenibacter palladensis
Strainstrain DSM 17539

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenibacter palladensis strain DSM 17539 genome assembly, contig:

Gene Summary

Adenine Count

1677334 bp

Thymine Count

1668903 bp

Guanine Count

1088995 bp

Cytosine Count

1109581 bp

Genome Length

5551910 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN03080594_10414Not AvailablePositive2985715 - 298613415300.1
ompa family proteinSAMN03080594_10415Not AvailablePositive2986293 - 298737840805.3
cold-shock dna-binding protein familySAMN03080594_10416Not AvailablePositive2987503 - 29876947042.35
uncharacterized protein, contains sis (sugar isomerase) phosphosugar binding domainSAMN03080594_10417Not AvailablePositive2988812 - 298952826159.7
mn2+ and fe2+ transporters of the nramp familySAMN03080594_10418Not AvailableNegative2989545 - 299081946140.7
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN03080594_10419Not AvailableNegative2990824 - 299149223939.1
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN03080594_10420Not AvailableNegative2991694 - 299245826791.0
mfs transporter, acs family, hexuronate transporterSAMN03080594_10421Not AvailableNegative2992489 - 299377246782.9
transcriptional regulator, gntr familySAMN03080594_10422Not AvailableNegative2994015 - 299477929262.6
starch-binding associating with outer membraneSAMN03080594_10423Not AvailableNegative2995139 - 299647347600.1

Displaying genes 2511 – 2520 of 4616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.