Arenibacter palladensis strain DSM 17539

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Arenibacter

Description

Arenibacter palladensis strain DSM 17539 is a Gram-negative, aerobic, motile bacterium characterized by its rod shape. This strain is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. Arenibacter palladensis is non-spore-forming and possesses a single replicon. The absence of spores suggests that the bacterium may have specific survival strategies in its environmental niche rather than relying on sporulation for resilience. The strain is cataloged under accession number FQUX00000000.1, which provides a reference for further genetic and genomic study. Ecologically, the traits of Arenibacter palladensis suggest its potential role in various environments, likely thriving in habitats that maintain moderate temperatures and provide sufficient oxygen. Its motility may facilitate interactions with other microorganisms or substrates, enhancing its role in nutrient cycling or biogeochemical processes. The specific aerobic requirement also indicates that it may participate in aerobic decomposition processes, contributing to the breakdown of organic materials in its ecosystem. Overall, the characteristics of Arenibacter palladensis strain DSM 17539 highlight its adaptability and potential ecological significance in mesophilic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusArenibacter
SpeciesArenibacter palladensis
Strainstrain DSM 17539

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenibacter palladensis strain DSM 17539 genome assembly, contig:

Gene Summary

Adenine Count

1677334 bp

Thymine Count

1668903 bp

Guanine Count

1088995 bp

Cytosine Count

1109581 bp

Genome Length

5551910 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipocalin-like domain-containing proteinSAMN03080594_103203Not AvailableNegative2652695 - 265309014835.7
hypothetical proteinSAMN03080594_103204Not AvailableNegative2653237 - 26534347763.7
d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)SAMN03080594_103205Not AvailablePositive2653522 - 265485050764.8
peptide-methionine (s)-s-oxide reductaseSAMN03080594_103206Not AvailableNegative2654844 - 265535319460.4
nudix-type nucleoside diphosphatase, yffh/adpp familySAMN03080594_103207Not AvailableNegative2655369 - 265595922590.9
tigr02453 family proteinSAMN03080594_103208Not AvailableNegative2656081 - 265673425405.3
tigr00266 family proteinSAMN03080594_103209Not AvailableNegative2656783 - 265758028307.2
protein of unknown functionSAMN03080594_103210Not AvailableNegative2657735 - 265819016980.7
hypothetical proteinSAMN03080594_103211Not AvailablePositive2658458 - 265893417819.9
transcriptional regulator, padr familySAMN03080594_103212Not AvailablePositive2659053 - 265938812767.4

Displaying genes 2231 – 2240 of 4616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.