Arenibacter palladensis strain DSM 17539

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Arenibacter

Description

Arenibacter palladensis strain DSM 17539 is a Gram-negative, aerobic, motile bacterium characterized by its rod shape. This strain is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperature conditions. Arenibacter palladensis is non-spore-forming and possesses a single replicon. The absence of spores suggests that the bacterium may have specific survival strategies in its environmental niche rather than relying on sporulation for resilience. The strain is cataloged under accession number FQUX00000000.1, which provides a reference for further genetic and genomic study. Ecologically, the traits of Arenibacter palladensis suggest its potential role in various environments, likely thriving in habitats that maintain moderate temperatures and provide sufficient oxygen. Its motility may facilitate interactions with other microorganisms or substrates, enhancing its role in nutrient cycling or biogeochemical processes. The specific aerobic requirement also indicates that it may participate in aerobic decomposition processes, contributing to the breakdown of organic materials in its ecosystem. Overall, the characteristics of Arenibacter palladensis strain DSM 17539 highlight its adaptability and potential ecological significance in mesophilic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusArenibacter
SpeciesArenibacter palladensis
Strainstrain DSM 17539

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenibacter palladensis strain DSM 17539 genome assembly, contig:

Gene Summary

Adenine Count

1677334 bp

Thymine Count

1668903 bp

Guanine Count

1088995 bp

Cytosine Count

1109581 bp

Genome Length

5551910 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl hydrolase family 63 c-terminal domain-containing proteinSAMN03080594_10333Not AvailablePositive2494942 - 2497578103537.0
cephalosporin-c deacetylaseSAMN03080594_10334Not AvailablePositive2497769 - 249906148482.6
predicted dehydrogenaseSAMN03080594_10335Not AvailablePositive2499124 - 250041348316.0
hypothetical proteinSAMN03080594_10336Not AvailablePositive2500537 - 250093815171.5
hypothetical proteinSAMN03080594_10337Not AvailableNegative2500882 - 25010586758.2
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN03080594_10338Not AvailablePositive2501103 - 250186427454.7
protein of unknown functionSAMN03080594_10339Not AvailableNegative2501933 - 250251722073.4
hypothetical proteinSAMN03080594_10340Not AvailableNegative2502788 - 250399345679.4
carbonic anhydraseSAMN03080594_10341Not AvailableNegative2504231 - 250487224356.3
sulfate permease, mfs superfamilySAMN03080594_10342Not AvailableNegative2504891 - 250645056062.0

Displaying genes 2061 – 2070 of 4616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.