Chryseobacterium limigenitum strain SUR2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium limigenitum strain SUR2 is a rod-shaped bacterium characterized by a single replicon. This strain is classified under the genus Chryseobacterium, which includes a variety of species known for their environmental versatility and potential biotechnological applications. The genomic information for strain SUR2 is cataloged under the accession number FPKW00000000.1, which allows for further investigation into its genetic makeup and potential functions. The simplicity of having one replicon suggests a streamlined genetic organization, which may facilitate adaptability in various environments. Chryseobacterium species, including C. limigenitum, are often found in soil and water ecosystems, indicating their role in nutrient cycling and organic matter degradation. The presence of such bacteria in these environments can contribute to the overall health of ecosystems by breaking down complex organic materials, thus releasing nutrients back into the soil or aquatic systems for use by other organisms. In summary, Chryseobacterium limigenitum strain SUR2, with its rod shape and single replicon, represents a distinct member of its genus, with implications for ecological interactions and biogeochemical processes in its natural habitats. The study of this strain could shed light on its specific roles in environmental microbiology and its potential utility in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium limigenitum
Strainstrain SUR2

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium limigenitum strain SUR2 genome assembly, contig:

Gene Summary

Adenine Count

1546900 bp

Thymine Count

1534822 bp

Guanine Count

822199 bp

Cytosine Count

793804 bp

Genome Length

4697725 bp

Protein-coding Genes

4322 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transaldolaseSAMN05216324_1016Not AvailableNegative4575 - 522823621.8
protein of unknown functionSAMN05216324_1017Not AvailablePositive5456 - 56477250.95
bacteriocin-protection, ydei or ompd-associatedSAMN05216324_1018Not AvailablePositive5660 - 594110809.0
hypothetical proteinSAMN05216324_1019Not AvailableNegative5982 - 654220380.7
dipeptidase eSAMN05216324_10110Not AvailablePositive6740 - 743525860.9
hypothetical proteinSAMN05216324_10111Not AvailablePositive7445 - 799921684.6
d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)SAMN05216324_10112Not AvailablePositive8054 - 942750232.2
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN05216324_10113Not AvailablePositive9434 - 1058844076.0
predicted metalloprotease, contains c-terminal pdz domainSAMN05216324_10114Not AvailableNegative10830 - 1268670261.9
peptidase family m1SAMN05216324_10115Not AvailableNegative12839 - 1447062886.2

Displaying genes 11 – 20 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.