Paracoccus pantotrophus strain DSM 1403

Cocci

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus pantotrophus strain DSM 1403 is a coccus-shaped bacterium characterized by the presence of flagella. This motility feature enables the organism to navigate its environment effectively. The strain is noted for having a single replicon, which indicates a streamlined genomic organization, potentially facilitating efficient replication and cellular functions. The genomic information for Paracoccus pantotrophus strain DSM 1403 can be accessed through the accession number FPKI00000000.1, providing a resource for researchers interested in studying its genetic makeup and related traits. Biologically, Paracoccus pantotrophus is known for its versatility in metabolic capabilities, which can include the ability to utilize a variety of substrates for growth. This adaptability may contribute to its ecological role in various environments, particularly in soil and aquatic systems, where it can participate in nutrient cycling and organic matter decomposition. The combination of its coccus shape and flagellar motility suggests that it is well-suited for colonizing diverse niches and responding to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus pantotrophus
Strainstrain DSM 1403

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus pantotrophus strain DSM 1403 genome assembly, contig:

Gene Summary

Adenine Count

873177 bp

Thymine Count

875419 bp

Guanine Count

1838488 bp

Cytosine Count

1843143 bp

Genome Length

5431076 bp

Protein-coding Genes

5246 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalt-precorrin 5a hydrolaseSAMN04244548_00762Not AvailablePositive781514 - 78186411195.6
precorrin-4 c11-methyltransferaseSAMN04244548_00763Not AvailablePositive781861 - 78263426831.3
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthaseSAMN04244548_00764Not AvailablePositive782631 - 78392044633.5
precorrin-6a synthase (deacetylating)SAMN04244548_00765Not AvailablePositive783917 - 78466627286.3
protein of unknown functionSAMN04244548_00766Not AvailablePositive784651 - 78495910877.4
cytochrome c556SAMN04244548_00767Not AvailablePositive785329 - 78578415621.3
cytochrome bSAMN04244548_00768Not AvailablePositive785784 - 78636521487.7
hypothetical proteinSAMN04244548_00769Not AvailablePositive786470 - 7866255054.03
dna topoisomerase iv subunit aSAMN04244548_00770Not AvailableNegative786656 - 78889982695.6
short-chain dehydrogenaseSAMN04244548_00771Not AvailablePositive789003 - 78982130255.7

Displaying genes 941 – 950 of 5398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.