Paracoccus pantotrophus strain DSM 1403

Cocci

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus pantotrophus strain DSM 1403 is a coccus-shaped bacterium characterized by the presence of flagella. This motility feature enables the organism to navigate its environment effectively. The strain is noted for having a single replicon, which indicates a streamlined genomic organization, potentially facilitating efficient replication and cellular functions. The genomic information for Paracoccus pantotrophus strain DSM 1403 can be accessed through the accession number FPKI00000000.1, providing a resource for researchers interested in studying its genetic makeup and related traits. Biologically, Paracoccus pantotrophus is known for its versatility in metabolic capabilities, which can include the ability to utilize a variety of substrates for growth. This adaptability may contribute to its ecological role in various environments, particularly in soil and aquatic systems, where it can participate in nutrient cycling and organic matter decomposition. The combination of its coccus shape and flagellar motility suggests that it is well-suited for colonizing diverse niches and responding to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus pantotrophus
Strainstrain DSM 1403

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus pantotrophus strain DSM 1403 genome assembly, contig:

Gene Summary

Adenine Count

873177 bp

Thymine Count

875419 bp

Guanine Count

1838488 bp

Cytosine Count

1843143 bp

Genome Length

5431076 bp

Protein-coding Genes

5246 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate isomerase/epimeraseSAMN04244548_05365Not AvailablePositive5383288 - 538410328893.5
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN04244548_05366Not AvailablePositive5384103 - 538460917974.8
dna-binding transcriptional regulator, lysr familySAMN04244548_05367Not AvailablePositive5385072 - 538598133797.8
transcriptional regulator, contains xre-family hth domainSAMN04244548_05368Not AvailablePositive5386350 - 538830870548.0
4-azaleucine resistance probable transporter azlcSAMN04244548_05369Not AvailablePositive5388308 - 538898523058.4
dna-binding transcriptional regulator, lysr familySAMN04244548_05370Not AvailablePositive5389669 - 539060534994.1
tripartite atp-independent transporter, dctm componentSAMN04244548_05371Not AvailablePositive5390607 - 539098413809.0
acyl-coa thioesterase fadmSAMN04244548_05372Not AvailablePositive5391074 - 539190729592.4
hypothetical proteinSAMN04244548_05373Not AvailablePositive5391987 - 53922087515.09
short-chain dehydrogenaseSAMN04244548_05374Not AvailablePositive5392599 - 539342929335.8

Displaying genes 5351 – 5360 of 5398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.