Paracoccus pantotrophus strain DSM 1403

Cocci

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus pantotrophus strain DSM 1403 is a coccus-shaped bacterium characterized by the presence of flagella. This motility feature enables the organism to navigate its environment effectively. The strain is noted for having a single replicon, which indicates a streamlined genomic organization, potentially facilitating efficient replication and cellular functions. The genomic information for Paracoccus pantotrophus strain DSM 1403 can be accessed through the accession number FPKI00000000.1, providing a resource for researchers interested in studying its genetic makeup and related traits. Biologically, Paracoccus pantotrophus is known for its versatility in metabolic capabilities, which can include the ability to utilize a variety of substrates for growth. This adaptability may contribute to its ecological role in various environments, particularly in soil and aquatic systems, where it can participate in nutrient cycling and organic matter decomposition. The combination of its coccus shape and flagellar motility suggests that it is well-suited for colonizing diverse niches and responding to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus pantotrophus
Strainstrain DSM 1403

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus pantotrophus strain DSM 1403 genome assembly, contig:

Gene Summary

Adenine Count

873177 bp

Thymine Count

875419 bp

Guanine Count

1838488 bp

Cytosine Count

1843143 bp

Genome Length

5431076 bp

Protein-coding Genes

5246 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gst-like proteinSAMN04244548_04725Not AvailableNegative4748432 - 474930732771.8
nitt/taut family transport system atp-binding proteinSAMN04244548_04726Not AvailablePositive4749604 - 475041329568.7
nitt/taut family transport system permease proteinSAMN04244548_04727Not AvailablePositive4750410 - 475118928769.8
nitt/taut family transport system substrate-binding proteinSAMN04244548_04728Not AvailablePositive4751204 - 475220534635.6
lysr family transcriptional regulator, nitrogen assimilation regulatory proteinSAMN04244548_04729Not AvailableNegative4752254 - 475318634029.3
crotonobetainyl-coa:carnitine coa-transferase caibSAMN04244548_04730Not AvailablePositive4753292 - 475447942576.7
hydroxymethylglutaryl-coa lyaseSAMN04244548_04731Not AvailablePositive4754481 - 475543433153.8
fmn-dependent dehydrogenaseSAMN04244548_04732Not AvailableNegative4755263 - 475609629527.6
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN04244548_04733Not AvailablePositive4756518 - 475757939720.4
glycosyltransferase involved in cell wall bisynthesisSAMN04244548_04734Not AvailableNegative4757790 - 475887538671.9

Displaying genes 4711 – 4720 of 5398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.