Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 | SAMN02927921_00618 | Not Available | Negative | 692256 - 692801 | 20100.6 |
| choline dehydrogenase | SAMN02927921_00619 | Not Available | Negative | 692804 - 694501 | 64161.1 |
| protein of unknown function | SAMN02927921_00620 | Not Available | Negative | 694548 - 695387 | 31598.0 |
| lysophospholipase l1 | SAMN02927921_00621 | Not Available | Negative | 695404 - 696141 | 27682.3 |
| carbon starvation protein csta | SAMN02927921_00622 | Not Available | Negative | 696134 - 697579 | 52766.5 |
| fad dependent oxidoreductase | SAMN02927921_00623 | Not Available | Negative | 697588 - 699267 | 62832.9 |
| starch-binding associating with outer membrane | SAMN02927921_00624 | Not Available | Negative | 699320 - 700786 | 55436.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN02927921_00625 | Not Available | Negative | 700811 - 704146 | 122319.0 |
| fecr family protein | SAMN02927921_00626 | Not Available | Negative | 704273 - 705436 | 44245.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02927921_00627 | Not Available | Positive | 705541 - 706125 | 23059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
