Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system, vipa, vc_a0107 or hcp2 | SAMN02927921_03706 | Not Available | Negative | 4395523 - 4395984 | 17374.7 |
| pkd repeat-containing protein | SAMN02927921_03707 | Not Available | Negative | 4396041 - 4397072 | 39054.6 |
| nlpc/p60 family protein | SAMN02927921_03708 | Not Available | Positive | 4397607 - 4398263 | 25282.5 |
| nlpc/p60 family protein | SAMN02927921_03709 | Not Available | Positive | 4398600 - 4399577 | 36876.8 |
| hypothetical protein | SAMN02927921_03710 | Not Available | Positive | 4399577 - 4400503 | 36908.3 |
| hypothetical protein | SAMN02927921_03711 | Not Available | Positive | 4400506 - 4401369 | 34143.6 |
| hypothetical protein | SAMN02927921_03712 | Not Available | Positive | 4401467 - 4402663 | 45949.5 |
| hypothetical protein | SAMN02927921_03713 | Not Available | Positive | 4402683 - 4403198 | 20189.5 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN02927921_03714 | Not Available | Positive | 4403218 - 4405695 | 91644.1 |
| gene 25-like lysozyme | SAMN02927921_03715 | Not Available | Positive | 4405711 - 4406142 | 17008.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
