Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase | SAMN02927921_03565 | Not Available | Positive | 4205186 - 4206760 | 58767.1 |
| carbohydrate binding module (family 6) | SAMN02927921_03566 | Not Available | Positive | 4206770 - 4208134 | 51482.9 |
| helix-turn-helix domain-containing protein | SAMN02927921_03567 | Not Available | Negative | 4208211 - 4209086 | 34059.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN02927921_03568 | Not Available | Positive | 4209515 - 4212547 | 111562.0 |
| starch-binding associating with outer membrane | SAMN02927921_03569 | Not Available | Positive | 4212552 - 4214198 | 63240.3 |
| alpha-l-fucosidase | SAMN02927921_03570 | Not Available | Positive | 4214313 - 4215965 | 62904.2 |
| hypothetical protein | SAMN02927921_03571 | Not Available | Positive | 4215971 - 4216981 | 36434.0 |
| l-fucose dehydrogenase | SAMN02927921_03572 | Not Available | Positive | 4217048 - 4217839 | 28498.3 |
| l-rhamnose mutarotase | SAMN02927921_03573 | Not Available | Positive | 4217895 - 4218257 | 14386.5 |
| alpha-glucuronidase | SAMN02927921_03574 | Not Available | Negative | 4218320 - 4220509 | 83324.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
