Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02927921_03284 | Not Available | Negative | 3862461 - 3863666 | 45347.2 |
| type iv pilus assembly protein pilq | SAMN02927921_03285 | Not Available | Negative | 3863668 - 3865926 | 83433.0 |
| type iv pilus assembly protein pilb | SAMN02927921_03286 | Not Available | Negative | 3865926 - 3867338 | 52976.9 |
| hypothetical protein | SAMN02927921_03287 | Not Available | Negative | 3867344 - 3867889 | 20164.2 |
| type iv pilus assembly protein pile | SAMN02927921_03288 | Not Available | Negative | 3868062 - 3868481 | 15683.8 |
| yd repeat-containing protein | SAMN02927921_03289 | Not Available | Positive | 3869028 - 3872522 | 131577.0 |
| putative metal-binding motif-containing protein | SAMN02927921_03290 | Not Available | Positive | 3872540 - 3877051 | 167730.0 |
| hypothetical protein | SAMN02927921_03291 | Not Available | Positive | 3877054 - 3877524 | 18074.8 |
| rhs repeat-associated core domain-containing protein | SAMN02927921_03292 | Not Available | Positive | 3877972 - 3879780 | 67322.3 |
| hypothetical protein | SAMN02927921_03293 | Not Available | Positive | 3879752 - 3880183 | 17700.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
