Sinomicrobium oceani strain CGMCC 1.12145

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Sinomicrobium

Description

Sinomicrobium oceani strain CGMCC 1.12145 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is mesophilic, with an optimal growth temperature of 32°C, indicating its preference for moderate temperature conditions. Notably, Sinomicrobium oceani possesses a single replicon, suggesting a streamlined genomic organization that may facilitate efficient replication and cellular function. Additionally, it is classified as non-spore-forming, which influences its survival strategies in various environments. The ecological significance of Sinomicrobium oceani may be linked to its adaptation to marine environments, given its isolation source. Its aerobic nature implies a role in organic matter decomposition and nutrient cycling in oceanic ecosystems. The strain's characteristics position it as a potential contributor to microbial communities in aquatic habitats, where it could participate in biogeochemical processes. Overall, Sinomicrobium oceani strain CGMCC 1.12145 exemplifies a specialized microbial entity within its ecological niche, reflecting the diversity and functional potential of marine bacteria in sustaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSinomicrobium
SpeciesSinomicrobium oceani
Strainstrain CGMCC 1.12145

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinomicrobium oceani strain CGMCC 1.12145 genome assembly, contig:

Gene Summary

Adenine Count

1380713 bp

Thymine Count

1391607 bp

Guanine Count

1117537 bp

Cytosine Count

1132554 bp

Genome Length

5026272 bp

Protein-coding Genes

4225 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase involved in cell wall bisynthesisSAMN02927921_03012Not AvailableNegative3524152 - 352536046285.7
polysaccharide pyruvyl transferaseSAMN02927921_03013Not AvailableNegative3525372 - 352636438045.0
membrane protein involved in the export of o-antigen and teichoic acidSAMN02927921_03014Not AvailableNegative3526361 - 352771052005.6
udpglucose 6-dehydrogenaseSAMN02927921_03015Not AvailableNegative3527911 - 352932952238.3
hypothetical proteinSAMN02927921_03016Not AvailablePositive3529447 - 35295875588.85
dtdp-glucose 4,6-dehydrataseSAMN02927921_03017Not AvailableNegative3530804 - 353184138965.8
very-short-patch-repair endonucleaseSAMN02927921_03018Not AvailableNegative3532014 - 353241516053.4
dtdp-4-dehydrorhamnose reductaseSAMN02927921_03019Not AvailableNegative3533212 - 353406931323.2
dtdp-4-dehydrorhamnose 3,5-epimeraseSAMN02927921_03020Not AvailableNegative3534062 - 353463422059.2
hypothetical proteinSAMN02927921_03021Not AvailablePositive3535008 - 353547217371.1

Displaying genes 3011 – 3020 of 4278 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.