Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN02927921_02551 | Not Available | Positive | 2988871 - 2989710 | 30967.3 |
| helix-turn-helix domain-containing protein | SAMN02927921_02552 | Not Available | Positive | 2989718 - 2990629 | 34972.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN02927921_02553 | Not Available | Negative | 2990808 - 2991683 | 32691.3 |
| transcriptional regulator, tetr family | SAMN02927921_02554 | Not Available | Negative | 2991694 - 2992251 | 21240.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02927921_02555 | Not Available | Negative | 2992407 - 2993021 | 23654.6 |
| fecr family protein | SAMN02927921_02556 | Not Available | Positive | 2993135 - 2994298 | 44076.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN02927921_02557 | Not Available | Positive | 2994403 - 2997807 | 124290.0 |
| starch-binding associating with outer membrane | SAMN02927921_02558 | Not Available | Positive | 2997824 - 2999206 | 51690.7 |
| glycosyl hydrolase family 63 c-terminal domain-containing protein | SAMN02927921_02559 | Not Available | Positive | 2999500 - 3002277 | 105709.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN02927921_02560 | Not Available | Negative | 3002426 - 3005773 | 121391.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
