Sinomicrobium oceani strain CGMCC 1.12145

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Sinomicrobium

Description

Sinomicrobium oceani strain CGMCC 1.12145 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is mesophilic, with an optimal growth temperature of 32°C, indicating its preference for moderate temperature conditions. Notably, Sinomicrobium oceani possesses a single replicon, suggesting a streamlined genomic organization that may facilitate efficient replication and cellular function. Additionally, it is classified as non-spore-forming, which influences its survival strategies in various environments. The ecological significance of Sinomicrobium oceani may be linked to its adaptation to marine environments, given its isolation source. Its aerobic nature implies a role in organic matter decomposition and nutrient cycling in oceanic ecosystems. The strain's characteristics position it as a potential contributor to microbial communities in aquatic habitats, where it could participate in biogeochemical processes. Overall, Sinomicrobium oceani strain CGMCC 1.12145 exemplifies a specialized microbial entity within its ecological niche, reflecting the diversity and functional potential of marine bacteria in sustaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSinomicrobium
SpeciesSinomicrobium oceani
Strainstrain CGMCC 1.12145

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinomicrobium oceani strain CGMCC 1.12145 genome assembly, contig:

Gene Summary

Adenine Count

1380713 bp

Thymine Count

1391607 bp

Guanine Count

1117537 bp

Cytosine Count

1132554 bp

Genome Length

5026272 bp

Protein-coding Genes

4225 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN02927921_02551Not AvailablePositive2988871 - 298971030967.3
helix-turn-helix domain-containing proteinSAMN02927921_02552Not AvailablePositive2989718 - 299062934972.8
pimeloyl-acp methyl ester carboxylesteraseSAMN02927921_02553Not AvailableNegative2990808 - 299168332691.3
transcriptional regulator, tetr familySAMN02927921_02554Not AvailableNegative2991694 - 299225121240.6
rna polymerase sigma-70 factor, ecf subfamilySAMN02927921_02555Not AvailableNegative2992407 - 299302123654.6
fecr family proteinSAMN02927921_02556Not AvailablePositive2993135 - 299429844076.7
tonb-linked outer membrane protein, susc/raga familySAMN02927921_02557Not AvailablePositive2994403 - 2997807124290.0
starch-binding associating with outer membraneSAMN02927921_02558Not AvailablePositive2997824 - 299920651690.7
glycosyl hydrolase family 63 c-terminal domain-containing proteinSAMN02927921_02559Not AvailablePositive2999500 - 3002277105709.0
por secretion system c-terminal sorting domain-containing proteinSAMN02927921_02560Not AvailableNegative3002426 - 3005773121391.0

Displaying genes 2551 – 2560 of 4278 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.