Sinomicrobium oceani strain CGMCC 1.12145

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Sinomicrobium

Description

Sinomicrobium oceani strain CGMCC 1.12145 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is mesophilic, with an optimal growth temperature of 32°C, indicating its preference for moderate temperature conditions. Notably, Sinomicrobium oceani possesses a single replicon, suggesting a streamlined genomic organization that may facilitate efficient replication and cellular function. Additionally, it is classified as non-spore-forming, which influences its survival strategies in various environments. The ecological significance of Sinomicrobium oceani may be linked to its adaptation to marine environments, given its isolation source. Its aerobic nature implies a role in organic matter decomposition and nutrient cycling in oceanic ecosystems. The strain's characteristics position it as a potential contributor to microbial communities in aquatic habitats, where it could participate in biogeochemical processes. Overall, Sinomicrobium oceani strain CGMCC 1.12145 exemplifies a specialized microbial entity within its ecological niche, reflecting the diversity and functional potential of marine bacteria in sustaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSinomicrobium
SpeciesSinomicrobium oceani
Strainstrain CGMCC 1.12145

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinomicrobium oceani strain CGMCC 1.12145 genome assembly, contig:

Gene Summary

Adenine Count

1380713 bp

Thymine Count

1391607 bp

Guanine Count

1117537 bp

Cytosine Count

1132554 bp

Genome Length

5026272 bp

Protein-coding Genes

4225 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease-5SAMN02927921_02431Not AvailablePositive2845856 - 284728354313.1
protein of unknown functionSAMN02927921_02432Not AvailablePositive2847323 - 284789519927.0
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)SAMN02927921_02433Not AvailablePositive2848117 - 284884527488.2
putative hydrolase of the had superfamilySAMN02927921_02434Not AvailablePositive2848836 - 284953426551.8
alcohol dehydrogenase, class ivSAMN02927921_02435Not AvailablePositive2849685 - 285076439841.9
single-strand binding proteinSAMN02927921_02436Not AvailablePositive2851123 - 285145512474.1
atp-dependent dna helicase recqSAMN02927921_02437Not AvailablePositive2851598 - 285368578540.5
arac-type dna-binding proteinSAMN02927921_02438Not AvailableNegative2853695 - 285454332481.0
altronate hydrolaseSAMN02927921_02439Not AvailablePositive2854738 - 285640260842.1
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN02927921_02440Not AvailablePositive2856487 - 285724226817.3

Displaying genes 2431 – 2440 of 4278 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.