Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol peroxidase, atypical 2-cys peroxiredoxin | SAMN02927921_02339 | Not Available | Negative | 2734974 - 2735474 | 17796.2 |
| hypothetical protein | SAMN02927921_02340 | Not Available | Negative | 2735641 - 2735898 | 9588.57 |
| thioredoxin | SAMN02927921_02341 | Not Available | Negative | 2735938 - 2736246 | 11349.4 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN02927921_02342 | Not Available | Negative | 2736417 - 2737055 | 23716.8 |
| transporter, nhac family (tc 2.a.35) | SAMN02927921_02343 | Not Available | Negative | 2737315 - 2738769 | 51353.5 |
| methionine-gamma-lyase | SAMN02927921_02344 | Not Available | Negative | 2739103 - 2740299 | 43295.8 |
| methionine synthase (b12-independent) | SAMN02927921_02345 | Not Available | Negative | 2740542 - 2742845 | 87024.3 |
| vitamin b12 transporter | SAMN02927921_02348 | Not Available | Positive | 2743835 - 2745730 | 70309.8 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN02927921_02349 | Not Available | Negative | 2745834 - 2747303 | 54906.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02927921_02350 | Not Available | Positive | 2747627 - 2748136 | 19653.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
