Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02927921_02139 | Not Available | Negative | 2511648 - 2512226 | 22933.2 |
| hypothetical protein | SAMN02927921_02140 | Not Available | Negative | 2512230 - 2512460 | 9292.32 |
| wg containing repeat-containing protein | SAMN02927921_02141 | Not Available | Negative | 2512562 - 2514802 | 86398.1 |
| tpr repeat | SAMN02927921_02142 | Not Available | Negative | 2514807 - 2516471 | 62202.8 |
| sel1 repeat-containing protein | SAMN02927921_02143 | Not Available | Negative | 2516542 - 2518002 | 54561.3 |
| pas domain s-box-containing protein | SAMN02927921_02144 | Not Available | Positive | 2518155 - 2518940 | 30414.1 |
| predicted arabinose efflux permease, mfs family | SAMN02927921_02145 | Not Available | Negative | 2519199 - 2520404 | 44525.6 |
| helix-turn-helix domain-containing protein | SAMN02927921_02146 | Not Available | Negative | 2520493 - 2521410 | 36029.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02927921_02147 | Not Available | Positive | 2521755 - 2522303 | 21200.7 |
| astacin (peptidase family m12a) | SAMN02927921_02148 | Not Available | Negative | 2522516 - 2523250 | 27567.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
